Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP45Q70EL2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.23■□□□□ 0.03
USP45Q70EL2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP45Q70EL2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP45Q70EL2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP45Q70EL2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.23■□□□□ 0.03
USP45Q70EL2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.23■□□□□ 0.03
USP45Q70EL2 AC091951.1-201ENST00000512854 2465 ntBASIC15.23■□□□□ 0.03
USP45Q70EL2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP45Q70EL2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.23■□□□□ 0.03
USP45Q70EL2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP45Q70EL2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
USP45Q70EL2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
USP45Q70EL2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.23■□□□□ 0.03
USP45Q70EL2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.23■□□□□ 0.03
USP45Q70EL2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
USP45Q70EL2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.22■□□□□ 0.03
USP45Q70EL2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.22■□□□□ 0.03
USP45Q70EL2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.22■□□□□ 0.03
USP45Q70EL2 AL138709.1-201ENST00000614840 1693 ntBASIC15.22■□□□□ 0.03
USP45Q70EL2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.22■□□□□ 0.03
USP45Q70EL2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.22■□□□□ 0.03
USP45Q70EL2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.22■□□□□ 0.03
USP45Q70EL2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.22■□□□□ 0.03
USP45Q70EL2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.22■□□□□ 0.03
USP45Q70EL2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 OR8S1-201ENST00000310194 1080 ntBASIC15.22■□□□□ 0.03
USP45Q70EL2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
USP45Q70EL2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 CROCCP4-201ENST00000457096 498 ntBASIC15.22■□□□□ 0.03
USP45Q70EL2 ACA64.2-201ENST00000459014 129 ntBASIC15.22■□□□□ 0.03
USP45Q70EL2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.22■□□□□ 0.03
USP45Q70EL2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
USP45Q70EL2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 HILS1-202ENST00000545329 423 ntBASIC15.22■□□□□ 0.03
USP45Q70EL2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.22■□□□□ 0.03
USP45Q70EL2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.22■□□□□ 0.03
USP45Q70EL2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.22■□□□□ 0.03
USP45Q70EL2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
USP45Q70EL2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
USP45Q70EL2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
USP45Q70EL2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.22■□□□□ 0.03
USP45Q70EL2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
USP45Q70EL2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
USP45Q70EL2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
USP45Q70EL2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.21■□□□□ 0.03
USP45Q70EL2 GK-202ENST00000378941 458 ntTSL 3 BASIC15.21■□□□□ 0.03
USP45Q70EL2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.21■□□□□ 0.03
USP45Q70EL2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.21■□□□□ 0.03
USP45Q70EL2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
USP45Q70EL2 KRT90P-201ENST00000549264 1064 ntBASIC15.21■□□□□ 0.03
USP45Q70EL2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.21■□□□□ 0.03
USP45Q70EL2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
USP45Q70EL2 AC132938.4-201ENST00000623835 848 ntBASIC15.21■□□□□ 0.03
USP45Q70EL2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
USP45Q70EL2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 PDIA3P1-201ENST00000471856 1510 ntBASIC15.21■□□□□ 0.03
USP45Q70EL2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
USP45Q70EL2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
USP45Q70EL2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
USP45Q70EL2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.21■□□□□ 0.02
USP45Q70EL2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.21■□□□□ 0.02
USP45Q70EL2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
USP45Q70EL2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
USP45Q70EL2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
USP45Q70EL2 OR2I1P-209ENST00000641730 5365 ntBASIC15.21■□□□□ 0.02
USP45Q70EL2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.2■□□□□ 0.02
USP45Q70EL2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.2■□□□□ 0.02
USP45Q70EL2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.2■□□□□ 0.02
USP45Q70EL2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
USP45Q70EL2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.2■□□□□ 0.02
USP45Q70EL2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
USP45Q70EL2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
USP45Q70EL2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
USP45Q70EL2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.2■□□□□ 0.02
USP45Q70EL2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms