Protein–RNA interactions for Protein: Q3BBV0

NBPF1, Neuroblastoma breakpoint family member 1, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1Q3BBV0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 NDUFAB1P1-201ENST00000404262 460 ntBASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 AC005077.2-201ENST00000449786 690 ntBASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 SCARNA20.5-201ENST00000516991 142 ntBASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 AC131206.1-201ENST00000538078 1211 ntBASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 AC005324.6-201ENST00000587972 613 ntBASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 AC244452.3-201ENST00000636814 210 ntBASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
NBPF1Q3BBV0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 KRT8P29-201ENST00000420409 1371 ntBASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 GCOM2-201ENST00000509133 1104 ntBASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF1Q3BBV0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 AC006058.4-201ENST00000624016 1670 ntBASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 TLE1P1-201ENST00000422965 589 ntBASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 ATP6V0CP2-201ENST00000469409 207 ntBASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 ADM-202ENST00000524948 584 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 BX088702.1-201ENST00000610784 235 ntBASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 AL021578.1-201ENST00000613646 709 ntBASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 AC004899.1-201ENST00000424687 1714 ntBASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 LINC01101-201ENST00000622953 1884 ntBASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 AC144831.1-201ENST00000573312 2656 ntBASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 AC244394.1-201ENST00000435000 1665 ntBASIC21.09■□□□□ 0.97
NBPF1Q3BBV0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF1Q3BBV0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF1Q3BBV0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms