Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
EFNB3Q15768 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 TMBIM7P-203ENST00000641617 1718 ntBASIC12.94□□□□□ -0.34
EFNB3Q15768 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB3Q15768 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB3Q15768 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
EFNB3Q15768 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.94□□□□□ -0.34
EFNB3Q15768 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
EFNB3Q15768 PFN1P12-201ENST00000455938 534 ntBASIC12.94□□□□□ -0.34
EFNB3Q15768 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB3Q15768 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB3Q15768 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.94□□□□□ -0.34
EFNB3Q15768 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
EFNB3Q15768 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB3Q15768 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB3Q15768 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.94□□□□□ -0.34
EFNB3Q15768 RN7SL219P-201ENST00000582872 296 ntBASIC12.94□□□□□ -0.34
EFNB3Q15768 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
EFNB3Q15768 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.94□□□□□ -0.34
EFNB3Q15768 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB3Q15768 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
EFNB3Q15768 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.94□□□□□ -0.34
EFNB3Q15768 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
EFNB3Q15768 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB3Q15768 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB3Q15768 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.94□□□□□ -0.34
EFNB3Q15768 REXO1L4P-201ENST00000605109 1937 ntBASIC12.94□□□□□ -0.34
EFNB3Q15768 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
EFNB3Q15768 CICP11-201ENST00000434745 2827 ntBASIC12.94□□□□□ -0.34
EFNB3Q15768 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
EFNB3Q15768 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
EFNB3Q15768 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 FAM8A4P-201ENST00000435433 1213 ntBASIC12.93□□□□□ -0.34
EFNB3Q15768 Z93015.1-201ENST00000451718 390 ntBASIC12.93□□□□□ -0.34
EFNB3Q15768 RPL13AP20-201ENST00000459725 609 ntBASIC12.93□□□□□ -0.34
EFNB3Q15768 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.93□□□□□ -0.34
EFNB3Q15768 FAM86HP-204ENST00000513466 959 ntBASIC12.93□□□□□ -0.34
EFNB3Q15768 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 C2orf69P2-201ENST00000562032 1123 ntBASIC12.93□□□□□ -0.34
EFNB3Q15768 EEF1DP1-201ENST00000585891 896 ntBASIC12.93□□□□□ -0.34
EFNB3Q15768 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
EFNB3Q15768 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.93□□□□□ -0.34
EFNB3Q15768 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.93□□□□□ -0.34
EFNB3Q15768 LINC02228-204ENST00000642115 2962 ntBASIC12.93□□□□□ -0.34
EFNB3Q15768 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms