Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SKOR1P84550 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.03■□□□□ 0.16
SKOR1P84550 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.03■□□□□ 0.16
SKOR1P84550 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.03■□□□□ 0.16
SKOR1P84550 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.03■□□□□ 0.16
SKOR1P84550 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SKOR1P84550 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.03■□□□□ 0.16
SKOR1P84550 AC074338.1-201ENST00000416825 156 ntBASIC16.03■□□□□ 0.16
SKOR1P84550 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.03■□□□□ 0.16
SKOR1P84550 TSSK5P-201ENST00000423978 907 ntBASIC16.03■□□□□ 0.16
SKOR1P84550 CRB3P1-201ENST00000449338 276 ntBASIC16.03■□□□□ 0.16
SKOR1P84550 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.03■□□□□ 0.16
SKOR1P84550 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 RN7SL618P-201ENST00000477850 296 ntBASIC16.03■□□□□ 0.16
SKOR1P84550 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.03■□□□□ 0.16
SKOR1P84550 IGHV3-42-201ENST00000520410 361 ntBASIC16.03■□□□□ 0.16
SKOR1P84550 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.03■□□□□ 0.16
SKOR1P84550 AP005018.1-201ENST00000525475 301 ntBASIC16.03■□□□□ 0.16
SKOR1P84550 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.03■□□□□ 0.16
SKOR1P84550 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.03■□□□□ 0.16
SKOR1P84550 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.03■□□□□ 0.16
SKOR1P84550 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.03■□□□□ 0.16
SKOR1P84550 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.03■□□□□ 0.16
SKOR1P84550 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SKOR1P84550 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SKOR1P84550 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.03■□□□□ 0.16
SKOR1P84550 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SKOR1P84550 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SKOR1P84550 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SKOR1P84550 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SKOR1P84550 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.02■□□□□ 0.16
SKOR1P84550 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SKOR1P84550 ACE3P-201ENST00000423435 1973 ntBASIC16.02■□□□□ 0.16
SKOR1P84550 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SKOR1P84550 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.02■□□□□ 0.16
SKOR1P84550 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 TCAF1P1-201ENST00000414990 2232 ntBASIC16.02■□□□□ 0.16
SKOR1P84550 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.02■□□□□ 0.16
SKOR1P84550 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
SKOR1P84550 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SKOR1P84550 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.02■□□□□ 0.16
SKOR1P84550 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.02■□□□□ 0.16
SKOR1P84550 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.02■□□□□ 0.16
SKOR1P84550 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.02■□□□□ 0.16
SKOR1P84550 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.02■□□□□ 0.16
SKOR1P84550 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.02■□□□□ 0.16
SKOR1P84550 MTND2P7-201ENST00000521337 640 ntBASIC16.02■□□□□ 0.16
SKOR1P84550 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.02■□□□□ 0.16
SKOR1P84550 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.02■□□□□ 0.16
SKOR1P84550 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.02■□□□□ 0.16
SKOR1P84550 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.02■□□□□ 0.16
SKOR1P84550 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SKOR1P84550 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.02■□□□□ 0.16
SKOR1P84550 AL390754.1-201ENST00000619088 582 ntBASIC16.02■□□□□ 0.16
SKOR1P84550 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.02■□□□□ 0.16
SKOR1P84550 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.02■□□□□ 0.16
SKOR1P84550 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SKOR1P84550 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.02■□□□□ 0.16
SKOR1P84550 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
SKOR1P84550 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.02■□□□□ 0.16
SKOR1P84550 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SKOR1P84550 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.02■□□□□ 0.15
SKOR1P84550 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.02■□□□□ 0.15
SKOR1P84550 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.02■□□□□ 0.15
SKOR1P84550 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.02■□□□□ 0.15
SKOR1P84550 OR2I1P-210ENST00000642037 4691 ntBASIC16.02■□□□□ 0.15
SKOR1P84550 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SKOR1P84550 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms