Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.8□□□□□ -0.04
YBX1P67809 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
YBX1P67809 AC098614.1-201ENST00000368528 745 ntBASIC14.8□□□□□ -0.04
YBX1P67809 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.8□□□□□ -0.04
YBX1P67809 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
YBX1P67809 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.8□□□□□ -0.04
YBX1P67809 AC104457.1-201ENST00000401024 814 ntBASIC14.8□□□□□ -0.04
YBX1P67809 SOCS2P1-201ENST00000417727 557 ntBASIC14.8□□□□□ -0.04
YBX1P67809 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.8□□□□□ -0.04
YBX1P67809 RPL13AP25-201ENST00000484130 612 ntBASIC14.8□□□□□ -0.04
YBX1P67809 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.8□□□□□ -0.04
YBX1P67809 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.8□□□□□ -0.04
YBX1P67809 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.8□□□□□ -0.04
YBX1P67809 SAMD11P1-201ENST00000571429 661 ntBASIC14.8□□□□□ -0.04
YBX1P67809 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.8□□□□□ -0.04
YBX1P67809 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.8□□□□□ -0.04
YBX1P67809 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
YBX1P67809 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 AC010319.3-201ENST00000597028 470 ntBASIC14.8□□□□□ -0.04
YBX1P67809 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.8□□□□□ -0.04
YBX1P67809 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 AC093525.8-201ENST00000624099 1342 ntBASIC14.8□□□□□ -0.04
YBX1P67809 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
YBX1P67809 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.8□□□□□ -0.04
YBX1P67809 AL158070.2-201ENST00000623713 1621 ntBASIC14.8□□□□□ -0.04
YBX1P67809 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.8□□□□□ -0.04
YBX1P67809 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YBX1P67809 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.8□□□□□ -0.04
YBX1P67809 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
YBX1P67809 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.79□□□□□ -0.04
YBX1P67809 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.79□□□□□ -0.04
YBX1P67809 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
YBX1P67809 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
YBX1P67809 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
YBX1P67809 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.79□□□□□ -0.04
YBX1P67809 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.79□□□□□ -0.04
YBX1P67809 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.79□□□□□ -0.04
YBX1P67809 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.79□□□□□ -0.04
YBX1P67809 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.79□□□□□ -0.04
YBX1P67809 GHSR-202ENST00000427970 912 ntBASIC14.79□□□□□ -0.04
YBX1P67809 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.79□□□□□ -0.04
YBX1P67809 AC093433.1-201ENST00000458048 571 ntBASIC14.79□□□□□ -0.04
YBX1P67809 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.79□□□□□ -0.04
YBX1P67809 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
YBX1P67809 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.79□□□□□ -0.04
YBX1P67809 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.79□□□□□ -0.04
YBX1P67809 BX640514.1-201ENST00000583223 1918 ntBASIC14.79□□□□□ -0.04
YBX1P67809 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.79□□□□□ -0.04
YBX1P67809 AC093813.1-201ENST00000605066 256 ntBASIC14.79□□□□□ -0.04
YBX1P67809 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
YBX1P67809 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.79□□□□□ -0.04
YBX1P67809 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.79□□□□□ -0.04
YBX1P67809 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.79□□□□□ -0.04
YBX1P67809 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
YBX1P67809 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.79□□□□□ -0.04
YBX1P67809 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
YBX1P67809 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
YBX1P67809 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms