Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.62□□□□□ -0.23
CLRN1P58418 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.62□□□□□ -0.23
CLRN1P58418 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.62□□□□□ -0.23
CLRN1P58418 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.62□□□□□ -0.23
CLRN1P58418 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.62□□□□□ -0.23
CLRN1P58418 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.62□□□□□ -0.23
CLRN1P58418 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.62□□□□□ -0.23
CLRN1P58418 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.62□□□□□ -0.23
CLRN1P58418 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLRN1P58418 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.62□□□□□ -0.23
CLRN1P58418 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 FGD5P1-202ENST00000614866 2498 ntBASIC13.62□□□□□ -0.23
CLRN1P58418 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLRN1P58418 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 AL138799.1-201ENST00000448213 1675 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLRN1P58418 AC134915.1-201ENST00000426461 574 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLRN1P58418 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 GAPDHP40-201ENST00000505218 1006 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 AC026410.3-201ENST00000514280 936 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.61□□□□□ -0.23
CLRN1P58418 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.61□□□□□ -0.23
CLRN1P58418 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.61□□□□□ -0.23
CLRN1P58418 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.61□□□□□ -0.23
CLRN1P58418 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.61□□□□□ -0.23
CLRN1P58418 AL132655.2-201ENST00000596276 594 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 AC093813.1-201ENST00000605066 256 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 AC093726.1-201ENST00000608064 963 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 AC099568.2-201ENST00000609194 695 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.61□□□□□ -0.23
CLRN1P58418 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.61□□□□□ -0.23
CLRN1P58418 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.61□□□□□ -0.23
CLRN1P58418 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 AC007787.1-201ENST00000588095 1583 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLRN1P58418 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 INTS4P2-202ENST00000614726 2019 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CLRN1P58418 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLRN1P58418 AC007541.1-201ENST00000570282 1469 ntBASIC13.61□□□□□ -0.23
CLRN1P58418 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms