Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
WNT3P56703 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 AC117489.1-201ENST00000625169 3217 ntBASIC14.36□□□□□ -0.11
WNT3P56703 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
WNT3P56703 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.36□□□□□ -0.11
WNT3P56703 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.36□□□□□ -0.11
WNT3P56703 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.36□□□□□ -0.11
WNT3P56703 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
WNT3P56703 WASH4P-201ENST00000564273 1246 ntBASIC14.36□□□□□ -0.11
WNT3P56703 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
WNT3P56703 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.36□□□□□ -0.11
WNT3P56703 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.36□□□□□ -0.11
WNT3P56703 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 AC063926.2-201ENST00000623766 1308 ntBASIC14.36□□□□□ -0.11
WNT3P56703 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
WNT3P56703 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
WNT3P56703 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
WNT3P56703 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 AC018665.1-201ENST00000622927 1362 ntBASIC14.35□□□□□ -0.11
WNT3P56703 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
WNT3P56703 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
WNT3P56703 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.35□□□□□ -0.11
WNT3P56703 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
WNT3P56703 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.35□□□□□ -0.11
WNT3P56703 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
WNT3P56703 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.35□□□□□ -0.11
WNT3P56703 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 GAPDHP21-201ENST00000450301 1010 ntBASIC14.35□□□□□ -0.11
WNT3P56703 RN7SL399P-201ENST00000471648 279 ntBASIC14.35□□□□□ -0.11
WNT3P56703 DOC2GP-202ENST00000514950 1163 ntBASIC14.35□□□□□ -0.11
WNT3P56703 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.35□□□□□ -0.11
WNT3P56703 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.35□□□□□ -0.11
WNT3P56703 AC023310.3-201ENST00000557027 670 ntBASIC14.35□□□□□ -0.11
WNT3P56703 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 AC100756.1-201ENST00000562736 682 ntBASIC14.35□□□□□ -0.11
WNT3P56703 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.35□□□□□ -0.11
WNT3P56703 AC138749.3-201ENST00000567691 622 ntBASIC14.35□□□□□ -0.11
WNT3P56703 AL049840.4-201ENST00000602422 811 ntBASIC14.35□□□□□ -0.11
WNT3P56703 CHCHD2P3-201ENST00000603038 451 ntBASIC14.35□□□□□ -0.11
WNT3P56703 AC116165.1-201ENST00000611806 668 ntBASIC14.35□□□□□ -0.11
WNT3P56703 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
WNT3P56703 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
WNT3P56703 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
WNT3P56703 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.35□□□□□ -0.11
WNT3P56703 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.35□□□□□ -0.11
WNT3P56703 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.35□□□□□ -0.11
WNT3P56703 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
WNT3P56703 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms