Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 OR8S1-201ENST00000310194 1080 ntBASIC16.57■□□□□ 0.24
NCKAP1LP55160 TPM3P8-201ENST00000330554 643 ntBASIC16.57■□□□□ 0.24
NCKAP1LP55160 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 KLF2P4-201ENST00000451959 1225 ntBASIC16.57■□□□□ 0.24
NCKAP1LP55160 CTBP2P5-201ENST00000454986 1264 ntBASIC16.57■□□□□ 0.24
NCKAP1LP55160 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 MIR6775-201ENST00000617557 69 ntBASIC16.57■□□□□ 0.24
NCKAP1LP55160 AC138466.3-201ENST00000619983 221 ntBASIC16.57■□□□□ 0.24
NCKAP1LP55160 AC138951.2-201ENST00000623455 1161 ntBASIC16.57■□□□□ 0.24
NCKAP1LP55160 RHOXF1P1-202ENST00000635473 501 ntBASIC16.57■□□□□ 0.24
NCKAP1LP55160 AC006453.4-201ENST00000636949 1252 ntBASIC16.57■□□□□ 0.24
NCKAP1LP55160 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 AC013726.1-201ENST00000563747 2285 ntBASIC16.56■□□□□ 0.24
NCKAP1LP55160 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 AC022210.1-201ENST00000449856 793 ntBASIC16.56■□□□□ 0.24
NCKAP1LP55160 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 AC104989.1-201ENST00000519711 778 ntBASIC16.56■□□□□ 0.24
NCKAP1LP55160 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NCKAP1LP55160 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCKAP1LP55160 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 FGD5P1-202ENST00000614866 2498 ntBASIC16.55■□□□□ 0.24
NCKAP1LP55160 AL138725.1-201ENST00000407347 1314 ntBASIC16.55■□□□□ 0.24
NCKAP1LP55160 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 RN7SKP230-201ENST00000365642 335 ntBASIC16.55■□□□□ 0.24
NCKAP1LP55160 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 FTLP10-202ENST00000505798 471 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms