Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC004945.1-201ENST00000416738 983 ntBASIC15.15■□□□□ 0.02
CSNK1DP48730 FAM21FP-201ENST00000426241 1131 ntBASIC15.15■□□□□ 0.02
CSNK1DP48730 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 CNN2P10-201ENST00000443067 918 ntBASIC15.15■□□□□ 0.02
CSNK1DP48730 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.15■□□□□ 0.02
CSNK1DP48730 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.15■□□□□ 0.02
CSNK1DP48730 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.15■□□□□ 0.02
CSNK1DP48730 ALG3P1-201ENST00000508806 1114 ntBASIC15.15■□□□□ 0.02
CSNK1DP48730 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1DP48730 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.15■□□□□ 0.02
CSNK1DP48730 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1DP48730 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CSNK1DP48730 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1DP48730 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1DP48730 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CSNK1DP48730 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CSNK1DP48730 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1DP48730 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1DP48730 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1DP48730 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1DP48730 AJ011931.1-201ENST00000618749 2492 ntBASIC15.15■□□□□ 0.02
CSNK1DP48730 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
CSNK1DP48730 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CSNK1DP48730 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1DP48730 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1DP48730 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CSNK1DP48730 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
CSNK1DP48730 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
CSNK1DP48730 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 AL136309.1-201ENST00000403917 691 ntBASIC15.14■□□□□ 0.01
CSNK1DP48730 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1DP48730 HOMER2P2-201ENST00000451621 847 ntBASIC15.14■□□□□ 0.01
CSNK1DP48730 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.14■□□□□ 0.01
CSNK1DP48730 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1DP48730 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1DP48730 AC073413.1-201ENST00000603927 732 ntBASIC15.14■□□□□ 0.01
CSNK1DP48730 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CSNK1DP48730 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1DP48730 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.14■□□□□ 0.01
CSNK1DP48730 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 LINC01101-201ENST00000622953 1884 ntBASIC15.14■□□□□ 0.01
CSNK1DP48730 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1DP48730 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1DP48730 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.14■□□□□ 0.01
CSNK1DP48730 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1DP48730 SALL4P5-201ENST00000419001 1760 ntBASIC15.13■□□□□ 0.01
CSNK1DP48730 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.13■□□□□ 0.01
CSNK1DP48730 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 AC011840.2-201ENST00000563063 1520 ntBASIC15.13■□□□□ 0.01
CSNK1DP48730 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.13■□□□□ 0.01
CSNK1DP48730 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1DP48730 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1DP48730 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1DP48730 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.13■□□□□ 0.01
CSNK1DP48730 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms