Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 ACE3P-201ENST00000423435 1973 ntBASIC13.56□□□□□ -0.24
CSNK1A1P48729 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 AP001582.1-201ENST00000525856 295 ntBASIC13.56□□□□□ -0.24
CSNK1A1P48729 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 AC124283.3-201ENST00000570869 594 ntBASIC13.56□□□□□ -0.24
CSNK1A1P48729 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 AL360270.3-201ENST00000609118 1348 ntBASIC13.56□□□□□ -0.24
CSNK1A1P48729 FAM45BP-202ENST00000592932 1624 ntBASIC13.56□□□□□ -0.24
CSNK1A1P48729 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CSNK1A1P48729 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSNK1A1P48729 KRT8P22-201ENST00000562317 1415 ntBASIC13.56□□□□□ -0.24
CSNK1A1P48729 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 ELK1P1-201ENST00000485699 580 ntBASIC13.55□□□□□ -0.24
CSNK1A1P48729 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.55□□□□□ -0.24
CSNK1A1P48729 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms