Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SLC6A12P48065 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SLC6A12P48065 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 AC068587.6-202ENST00000641839 5619 ntBASIC14.61□□□□□ -0.07
SLC6A12P48065 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 MSTO2P-201ENST00000314835 1709 ntBASIC14.61□□□□□ -0.07
SLC6A12P48065 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SLC6A12P48065 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC6A12P48065 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC6A12P48065 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 AL009178.2-201ENST00000597278 2719 ntBASIC14.6□□□□□ -0.07
SLC6A12P48065 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SLC6A12P48065 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.6□□□□□ -0.07
SLC6A12P48065 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC6A12P48065 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC6A12P48065 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
SLC6A12P48065 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC6A12P48065 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC6A12P48065 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC6A12P48065 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC6A12P48065 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC6A12P48065 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.59□□□□□ -0.07
SLC6A12P48065 ACTG1P3-201ENST00000431775 1114 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms