Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
NKX2-1P43699 AKAP8P1-201ENST00000434743 1349 ntBASIC12.51□□□□□ -0.41
NKX2-1P43699 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-1P43699 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-1P43699 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-1P43699 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-1P43699 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
NKX2-1P43699 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-1P43699 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-1P43699 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-1P43699 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-1P43699 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NKX2-1P43699 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-1P43699 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.51□□□□□ -0.41
NKX2-1P43699 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.51□□□□□ -0.41
NKX2-1P43699 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 REXO1L4P-201ENST00000605109 1937 ntBASIC12.5□□□□□ -0.41
NKX2-1P43699 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX2-1P43699 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NKX2-1P43699 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NKX2-1P43699 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.5□□□□□ -0.41
NKX2-1P43699 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.5□□□□□ -0.41
NKX2-1P43699 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.5□□□□□ -0.41
NKX2-1P43699 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.5□□□□□ -0.41
NKX2-1P43699 RNA5SP419-201ENST00000515908 135 ntBASIC12.5□□□□□ -0.41
NKX2-1P43699 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.5□□□□□ -0.41
NKX2-1P43699 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 AL049840.3-201ENST00000602669 611 ntBASIC12.5□□□□□ -0.41
NKX2-1P43699 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.5□□□□□ -0.41
NKX2-1P43699 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
NKX2-1P43699 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NKX2-1P43699 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.5□□□□□ -0.41
NKX2-1P43699 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
NKX2-1P43699 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
NKX2-1P43699 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.5□□□□□ -0.41
NKX2-1P43699 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NKX2-1P43699 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-1P43699 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-1P43699 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.49□□□□□ -0.41
NKX2-1P43699 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NKX2-1P43699 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NKX2-1P43699 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
NKX2-1P43699 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NKX2-1P43699 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-1P43699 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NKX2-1P43699 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
NKX2-1P43699 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-1P43699 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-1P43699 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-1P43699 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-1P43699 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-1P43699 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-1P43699 CICP17-201ENST00000418553 2377 ntBASIC12.49□□□□□ -0.41
NKX2-1P43699 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms