Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRPHP41219 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRPHP41219 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 AP006294.1-201ENST00000415407 339 ntBASIC17.14■□□□□ 0.33
PRPHP41219 KRT18P25-201ENST00000508931 1278 ntBASIC17.14■□□□□ 0.33
PRPHP41219 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.14■□□□□ 0.33
PRPHP41219 AC027307.3-201ENST00000594262 1100 ntBASIC17.14■□□□□ 0.33
PRPHP41219 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 AC025048.6-201ENST00000634326 1161 ntBASIC17.14■□□□□ 0.33
PRPHP41219 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.14■□□□□ 0.33
PRPHP41219 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.14■□□□□ 0.33
PRPHP41219 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.14■□□□□ 0.33
PRPHP41219 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.14■□□□□ 0.33
PRPHP41219 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.13■□□□□ 0.33
PRPHP41219 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRPHP41219 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PRPHP41219 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.13■□□□□ 0.33
PRPHP41219 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.13■□□□□ 0.33
PRPHP41219 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
PRPHP41219 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PRPHP41219 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.13■□□□□ 0.33
PRPHP41219 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.13■□□□□ 0.33
PRPHP41219 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRPHP41219 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.13■□□□□ 0.33
PRPHP41219 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.13■□□□□ 0.33
PRPHP41219 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.13■□□□□ 0.33
PRPHP41219 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.13■□□□□ 0.33
PRPHP41219 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PRPHP41219 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PRPHP41219 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PRPHP41219 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.13■□□□□ 0.33
PRPHP41219 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PRPHP41219 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PRPHP41219 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.13■□□□□ 0.33
PRPHP41219 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRPHP41219 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PRPHP41219 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRPHP41219 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRPHP41219 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.12■□□□□ 0.33
PRPHP41219 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.12■□□□□ 0.33
PRPHP41219 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.12■□□□□ 0.33
PRPHP41219 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.12■□□□□ 0.33
PRPHP41219 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 MIR3197-201ENST00000582241 73 ntBASIC17.12■□□□□ 0.33
PRPHP41219 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.12■□□□□ 0.33
PRPHP41219 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PRPHP41219 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRPHP41219 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PRPHP41219 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.12■□□□□ 0.33
PRPHP41219 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 KRT8P35-201ENST00000483942 1338 ntBASIC17.12■□□□□ 0.33
PRPHP41219 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRPHP41219 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms