Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE6BP35913 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE6BP35913 AC005632.3-201ENST00000605544 308 ntBASIC18.49■□□□□ 0.55
PDE6BP35913 MEG3_2.1-201ENST00000611456 105 ntBASIC18.49■□□□□ 0.55
PDE6BP35913 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE6BP35913 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDE6BP35913 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE6BP35913 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PDE6BP35913 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE6BP35913 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE6BP35913 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE6BP35913 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE6BP35913 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6BP35913 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6BP35913 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6BP35913 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.48■□□□□ 0.55
PDE6BP35913 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.48■□□□□ 0.55
PDE6BP35913 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6BP35913 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6BP35913 CICP11-201ENST00000434745 2827 ntBASIC18.48■□□□□ 0.55
PDE6BP35913 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6BP35913 AL512430.1-201ENST00000392575 860 ntBASIC18.48■□□□□ 0.55
PDE6BP35913 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.48■□□□□ 0.55
PDE6BP35913 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.48■□□□□ 0.55
PDE6BP35913 AL157407.1-201ENST00000435784 904 ntBASIC18.48■□□□□ 0.55
PDE6BP35913 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6BP35913 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6BP35913 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6BP35913 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.48■□□□□ 0.55
PDE6BP35913 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.48■□□□□ 0.55
PDE6BP35913 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.48■□□□□ 0.55
PDE6BP35913 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6BP35913 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.48■□□□□ 0.55
PDE6BP35913 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.48■□□□□ 0.55
PDE6BP35913 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.48■□□□□ 0.55
PDE6BP35913 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6BP35913 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6BP35913 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PDE6BP35913 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PDE6BP35913 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDE6BP35913 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDE6BP35913 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDE6BP35913 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.47■□□□□ 0.55
PDE6BP35913 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.47■□□□□ 0.55
PDE6BP35913 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PDE6BP35913 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 TLE1P1-201ENST00000422965 589 ntBASIC18.47■□□□□ 0.55
PDE6BP35913 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.47■□□□□ 0.55
PDE6BP35913 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.47■□□□□ 0.55
PDE6BP35913 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.47■□□□□ 0.55
PDE6BP35913 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.47■□□□□ 0.55
PDE6BP35913 CICP12-201ENST00000455801 843 ntBASIC18.47■□□□□ 0.55
PDE6BP35913 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.47■□□□□ 0.55
PDE6BP35913 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 AC006122.1-201ENST00000493323 440 ntBASIC18.47■□□□□ 0.55
PDE6BP35913 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.47■□□□□ 0.55
PDE6BP35913 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.47■□□□□ 0.55
PDE6BP35913 PHBP15-201ENST00000574228 665 ntBASIC18.47■□□□□ 0.55
PDE6BP35913 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
PDE6BP35913 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
PDE6BP35913 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.47■□□□□ 0.55
PDE6BP35913 AC007881.3-201ENST00000608897 607 ntBASIC18.47■□□□□ 0.55
PDE6BP35913 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
PDE6BP35913 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PDE6BP35913 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.47■□□□□ 0.55
PDE6BP35913 AC144522.1-201ENST00000625111 1658 ntBASIC18.47■□□□□ 0.55
PDE6BP35913 AC009090.5-201ENST00000624886 2285 ntBASIC18.47■□□□□ 0.55
PDE6BP35913 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.47■□□□□ 0.55
PDE6BP35913 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDE6BP35913 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.46■□□□□ 0.55
PDE6BP35913 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms