Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
COPB2P35606 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COPB2P35606 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.29■□□□□ 0.36
COPB2P35606 NKAIN1P1-201ENST00000435754 582 ntBASIC17.29■□□□□ 0.36
COPB2P35606 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COPB2P35606 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.29■□□□□ 0.36
COPB2P35606 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.29■□□□□ 0.36
COPB2P35606 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPB2P35606 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPB2P35606 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPB2P35606 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
COPB2P35606 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 AC012508.2-201ENST00000567613 1472 ntBASIC17.29■□□□□ 0.36
COPB2P35606 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.29■□□□□ 0.36
COPB2P35606 REXO1L5P-201ENST00000622260 2098 ntBASIC17.28■□□□□ 0.36
COPB2P35606 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
COPB2P35606 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
COPB2P35606 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
COPB2P35606 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
COPB2P35606 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.28■□□□□ 0.36
COPB2P35606 RN7SKP175-201ENST00000408472 289 ntBASIC17.28■□□□□ 0.36
COPB2P35606 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.28■□□□□ 0.36
COPB2P35606 UPF3AP2-201ENST00000457924 1132 ntBASIC17.28■□□□□ 0.36
COPB2P35606 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.28■□□□□ 0.36
COPB2P35606 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.28■□□□□ 0.36
COPB2P35606 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.28■□□□□ 0.36
COPB2P35606 AC005730.2-201ENST00000564549 1184 ntBASIC17.28■□□□□ 0.36
COPB2P35606 AC004466.1-201ENST00000599515 1080 ntBASIC17.28■□□□□ 0.36
COPB2P35606 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.28■□□□□ 0.36
COPB2P35606 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.28■□□□□ 0.36
COPB2P35606 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COPB2P35606 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COPB2P35606 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
COPB2P35606 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COPB2P35606 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
COPB2P35606 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COPB2P35606 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
COPB2P35606 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.27■□□□□ 0.36
COPB2P35606 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
COPB2P35606 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.27■□□□□ 0.36
COPB2P35606 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.27■□□□□ 0.36
COPB2P35606 AC011742.3-201ENST00000439053 820 ntBASIC17.27■□□□□ 0.36
COPB2P35606 FAM58BP-201ENST00000439056 645 ntBASIC17.27■□□□□ 0.36
COPB2P35606 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.27■□□□□ 0.36
COPB2P35606 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.27■□□□□ 0.36
COPB2P35606 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.27■□□□□ 0.36
COPB2P35606 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
COPB2P35606 AC022748.3-201ENST00000621828 275 ntBASIC17.27■□□□□ 0.36
COPB2P35606 AC015967.2-201ENST00000624092 234 ntBASIC17.27■□□□□ 0.36
COPB2P35606 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.27■□□□□ 0.36
COPB2P35606 AC006435.4-201ENST00000625037 234 ntBASIC17.27■□□□□ 0.36
COPB2P35606 AL356737.1-201ENST00000634391 234 ntBASIC17.27■□□□□ 0.36
COPB2P35606 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPB2P35606 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.27■□□□□ 0.36
COPB2P35606 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.27■□□□□ 0.35
COPB2P35606 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COPB2P35606 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.26■□□□□ 0.35
COPB2P35606 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.26■□□□□ 0.35
COPB2P35606 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.26■□□□□ 0.35
COPB2P35606 AC023824.1-201ENST00000562945 2975 ntBASIC17.26■□□□□ 0.35
COPB2P35606 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms