Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.54□□□□□ -0.24
HOXC12P31275 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HOXC12P31275 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.54□□□□□ -0.24
HOXC12P31275 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HOXC12P31275 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.54□□□□□ -0.24
HOXC12P31275 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.54□□□□□ -0.24
HOXC12P31275 AC092506.1-202ENST00000401022 528 ntBASIC13.54□□□□□ -0.24
HOXC12P31275 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.54□□□□□ -0.24
HOXC12P31275 PFN1P12-201ENST00000455938 534 ntBASIC13.54□□□□□ -0.24
HOXC12P31275 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.54□□□□□ -0.24
HOXC12P31275 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 KRT18P25-201ENST00000508931 1278 ntBASIC13.54□□□□□ -0.24
HOXC12P31275 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 AP001582.1-201ENST00000525856 295 ntBASIC13.54□□□□□ -0.24
HOXC12P31275 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HOXC12P31275 TDH-203ENST00000531764 1110 ntBASIC13.54□□□□□ -0.24
HOXC12P31275 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.54□□□□□ -0.24
HOXC12P31275 AC124283.3-201ENST00000570869 594 ntBASIC13.54□□□□□ -0.24
HOXC12P31275 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.54□□□□□ -0.24
HOXC12P31275 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.54□□□□□ -0.24
HOXC12P31275 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HOXC12P31275 PAUPAR-201ENST00000630360 2965 ntBASIC13.54□□□□□ -0.24
HOXC12P31275 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HOXC12P31275 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.54□□□□□ -0.24
HOXC12P31275 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HOXC12P31275 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HOXC12P31275 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HOXC12P31275 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HOXC12P31275 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXC12P31275 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXC12P31275 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXC12P31275 AL355864.2-201ENST00000447420 863 ntBASIC13.53□□□□□ -0.24
HOXC12P31275 AC108725.1-201ENST00000495472 409 ntBASIC13.53□□□□□ -0.24
HOXC12P31275 AC004066.1-201ENST00000502488 802 ntBASIC13.53□□□□□ -0.24
HOXC12P31275 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.53□□□□□ -0.24
HOXC12P31275 AC026410.3-201ENST00000514280 936 ntBASIC13.53□□□□□ -0.24
HOXC12P31275 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.53□□□□□ -0.24
HOXC12P31275 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXC12P31275 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXC12P31275 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXC12P31275 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 BX539320.1-201ENST00000623759 877 ntBASIC13.53□□□□□ -0.24
HOXC12P31275 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXC12P31275 AL139099.5-201ENST00000635274 300 ntBASIC13.53□□□□□ -0.24
HOXC12P31275 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXC12P31275 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 DRD5P1-201ENST00000456605 1438 ntBASIC13.53□□□□□ -0.24
HOXC12P31275 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXC12P31275 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXC12P31275 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXC12P31275 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.53□□□□□ -0.24
HOXC12P31275 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.53□□□□□ -0.24
HOXC12P31275 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HOXC12P31275 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.52□□□□□ -0.24
HOXC12P31275 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXC12P31275 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXC12P31275 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXC12P31275 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXC12P31275 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HOXC12P31275 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXC12P31275 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HOXC12P31275 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXC12P31275 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HOXC12P31275 CICP6-201ENST00000457191 2729 ntBASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms