Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 MTX1P1-201ENST00000440904 838 ntBASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 AC245100.3-201ENST00000441281 285 ntBASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 CNN2P10-201ENST00000443067 918 ntBASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 AL591846.1-201ENST00000451736 433 ntBASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 AC099548.2-209ENST00000480264 625 ntBASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 C2orf69P2-201ENST00000562032 1123 ntBASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 MIR4741-201ENST00000579822 90 ntBASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40ALP0C0E4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 AC104457.1-201ENST00000401024 814 ntBASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 AP001258.2-201ENST00000529891 490 ntBASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 MIR3615-201ENST00000581999 87 ntBASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 AL118558.3-201ENST00000607414 1079 ntBASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40ALP0C0E4 LINC02228-204ENST00000642115 2962 ntBASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms