Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV3P03979 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV3P03979 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 AC099063.4-201ENST00000641099 1602 ntBASIC12□□□□□ -0.49
TRGV3P03979 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRGV3P03979 AC006058.4-201ENST00000624016 1670 ntBASIC12□□□□□ -0.49
TRGV3P03979 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRGV3P03979 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12□□□□□ -0.49
TRGV3P03979 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12□□□□□ -0.49
TRGV3P03979 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRGV3P03979 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12□□□□□ -0.49
TRGV3P03979 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12□□□□□ -0.49
TRGV3P03979 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12□□□□□ -0.49
TRGV3P03979 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12□□□□□ -0.49
TRGV3P03979 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 RN7SL752P-201ENST00000463779 287 ntBASIC12□□□□□ -0.49
TRGV3P03979 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12□□□□□ -0.49
TRGV3P03979 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TRGV3P03979 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12□□□□□ -0.49
TRGV3P03979 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 AC124283.3-201ENST00000570869 594 ntBASIC12□□□□□ -0.49
TRGV3P03979 BX539320.1-201ENST00000623759 877 ntBASIC12□□□□□ -0.49
TRGV3P03979 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12□□□□□ -0.49
TRGV3P03979 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12□□□□□ -0.49
TRGV3P03979 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRGV3P03979 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12□□□□□ -0.49
TRGV3P03979 AC012508.2-201ENST00000567613 1472 ntBASIC12□□□□□ -0.49
TRGV3P03979 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TRGV3P03979 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRGV3P03979 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TRGV3P03979 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TRGV3P03979 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 AC006486.2-201ENST00000624246 2199 ntBASIC11.99□□□□□ -0.49
TRGV3P03979 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TRGV3P03979 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.99□□□□□ -0.49
TRGV3P03979 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.99□□□□□ -0.49
TRGV3P03979 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.99□□□□□ -0.49
TRGV3P03979 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 COX20P2-201ENST00000452636 358 ntBASIC11.99□□□□□ -0.49
TRGV3P03979 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 GAPDHP40-201ENST00000505218 1006 ntBASIC11.99□□□□□ -0.49
TRGV3P03979 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.99□□□□□ -0.49
TRGV3P03979 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TRGV3P03979 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.99□□□□□ -0.49
TRGV3P03979 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.99□□□□□ -0.49
TRGV3P03979 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.99□□□□□ -0.49
TRGV3P03979 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.99□□□□□ -0.49
TRGV3P03979 ENPP7P5-201ENST00000541031 1031 ntBASIC11.99□□□□□ -0.49
TRGV3P03979 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.99□□□□□ -0.49
TRGV3P03979 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.99□□□□□ -0.49
TRGV3P03979 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 WASH3P-207ENST00000560956 1394 ntBASIC11.99□□□□□ -0.49
TRGV3P03979 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.99□□□□□ -0.49
TRGV3P03979 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
TRGV3P03979 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRGV3P03979 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRGV3P03979 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms