Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RFPL1O75677 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RFPL1O75677 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RFPL1O75677 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RFPL1O75677 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 KRT18P43-201ENST00000469825 1281 ntBASIC15.28■□□□□ 0.04
RFPL1O75677 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RFPL1O75677 AC140912.1-201ENST00000577171 1054 ntBASIC15.28■□□□□ 0.04
RFPL1O75677 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
RFPL1O75677 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.28■□□□□ 0.04
RFPL1O75677 AL132655.2-201ENST00000596276 594 ntBASIC15.28■□□□□ 0.04
RFPL1O75677 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.28■□□□□ 0.04
RFPL1O75677 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RFPL1O75677 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RFPL1O75677 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFPL1O75677 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
RFPL1O75677 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.27■□□□□ 0.04
RFPL1O75677 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.27■□□□□ 0.04
RFPL1O75677 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RFPL1O75677 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.27■□□□□ 0.04
RFPL1O75677 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RFPL1O75677 AC068587.6-202ENST00000641839 5619 ntBASIC15.27■□□□□ 0.04
RFPL1O75677 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RFPL1O75677 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 RPL37AP1-201ENST00000412502 279 ntBASIC15.27■□□□□ 0.04
RFPL1O75677 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.27■□□□□ 0.04
RFPL1O75677 ATP5G2P4-201ENST00000442175 420 ntBASIC15.27■□□□□ 0.04
RFPL1O75677 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL1O75677 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.27■□□□□ 0.04
RFPL1O75677 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.27■□□□□ 0.04
RFPL1O75677 TP53TG3HP-202ENST00000569755 579 ntBASIC15.27■□□□□ 0.04
RFPL1O75677 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.27■□□□□ 0.04
RFPL1O75677 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.27■□□□□ 0.04
RFPL1O75677 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.27■□□□□ 0.03
RFPL1O75677 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RFPL1O75677 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL1O75677 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.27■□□□□ 0.03
RFPL1O75677 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL1O75677 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.27■□□□□ 0.03
RFPL1O75677 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL1O75677 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RFPL1O75677 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.27■□□□□ 0.03
RFPL1O75677 AC007541.1-201ENST00000570282 1469 ntBASIC15.27■□□□□ 0.03
RFPL1O75677 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.26■□□□□ 0.03
RFPL1O75677 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
RFPL1O75677 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.26■□□□□ 0.03
RFPL1O75677 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RFPL1O75677 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.26■□□□□ 0.03
RFPL1O75677 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RFPL1O75677 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL1O75677 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RFPL1O75677 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.26■□□□□ 0.03
RFPL1O75677 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms