Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TO15178 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TO15178 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TO15178 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.02□□□□□ -0.16
TO15178 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.02□□□□□ -0.16
TO15178 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TO15178 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.02□□□□□ -0.16
TO15178 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.02□□□□□ -0.16
TO15178 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TO15178 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TO15178 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TO15178 LRRC59-203ENST00000576448 1531 ntBASIC14.02□□□□□ -0.16
TO15178 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.02□□□□□ -0.16
TO15178 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TO15178 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.02□□□□□ -0.17
TO15178 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.02□□□□□ -0.17
TO15178 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
TO15178 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
TO15178 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.02□□□□□ -0.17
TO15178 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TO15178 EIF3FP3-201ENST00000434851 1086 ntBASIC14.02□□□□□ -0.17
TO15178 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.02□□□□□ -0.17
TO15178 AL355864.2-201ENST00000447420 863 ntBASIC14.02□□□□□ -0.17
TO15178 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.02□□□□□ -0.17
TO15178 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TO15178 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.02□□□□□ -0.17
TO15178 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.02□□□□□ -0.17
TO15178 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.02□□□□□ -0.17
TO15178 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.02□□□□□ -0.17
TO15178 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.02□□□□□ -0.17
TO15178 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.02□□□□□ -0.17
TO15178 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.02□□□□□ -0.17
TO15178 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
TO15178 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.02□□□□□ -0.17
TO15178 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TO15178 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TO15178 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.02□□□□□ -0.17
TO15178 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.02□□□□□ -0.17
TO15178 AL359258.3-201ENST00000622910 2331 ntBASIC14.02□□□□□ -0.17
TO15178 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TO15178 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TO15178 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TO15178 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TO15178 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TO15178 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.01□□□□□ -0.17
TO15178 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TO15178 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.01□□□□□ -0.17
TO15178 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.01□□□□□ -0.17
TO15178 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.01□□□□□ -0.17
TO15178 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TO15178 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 AC063926.2-201ENST00000623766 1308 ntBASIC14.01□□□□□ -0.17
TO15178 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TO15178 AC092933.1-201ENST00000393644 945 ntBASIC14.01□□□□□ -0.17
TO15178 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.01□□□□□ -0.17
TO15178 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TO15178 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
TO15178 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.01□□□□□ -0.17
TO15178 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.01□□□□□ -0.17
TO15178 AC106886.1-201ENST00000568660 600 ntBASIC14.01□□□□□ -0.17
TO15178 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TO15178 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TO15178 AL022328.1-201ENST00000610050 478 ntBASIC14.01□□□□□ -0.17
TO15178 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TO15178 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TO15178 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TO15178 AL137783.1-201ENST00000623494 1896 ntBASIC14.01□□□□□ -0.17
TO15178 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TO15178 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TO15178 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.01□□□□□ -0.17
TO15178 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.01□□□□□ -0.17
TO15178 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.01□□□□□ -0.17
TO15178 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.01□□□□□ -0.17
TO15178 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TO15178 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TO15178 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TO15178 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TO15178 AL009178.2-201ENST00000597278 2719 ntBASIC14□□□□□ -0.17
TO15178 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14□□□□□ -0.17
TO15178 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14□□□□□ -0.17
TO15178 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TO15178 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14□□□□□ -0.17
TO15178 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TO15178 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms