Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
CHD2O14647 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CHD2O14647 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC20.39■□□□□ 0.85
CHD2O14647 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC20.39■□□□□ 0.85
CHD2O14647 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC20.39■□□□□ 0.85
CHD2O14647 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.39■□□□□ 0.85
CHD2O14647 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD2O14647 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD2O14647 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.38■□□□□ 0.85
CHD2O14647 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD2O14647 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.38■□□□□ 0.85
CHD2O14647 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHD2O14647 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHD2O14647 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD2O14647 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHD2O14647 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CHD2O14647 PPP1R2P4-201ENST00000424051 595 ntBASIC20.38■□□□□ 0.85
CHD2O14647 AC083801.1-201ENST00000491689 358 ntBASIC20.38■□□□□ 0.85
CHD2O14647 AC226150.1-201ENST00000544259 466 ntBASIC20.38■□□□□ 0.85
CHD2O14647 AC010632.2-201ENST00000588369 1224 ntBASIC20.38■□□□□ 0.85
CHD2O14647 AC006548.2-201ENST00000605217 529 ntBASIC20.38■□□□□ 0.85
CHD2O14647 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD2O14647 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CHD2O14647 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD2O14647 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHD2O14647 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD2O14647 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD2O14647 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 FTX-216ENST00000638985 1367 ntTSL 5 BASIC20.37■□□□□ 0.85
CHD2O14647 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 AC006372.4-201ENST00000624122 1543 ntBASIC20.37■□□□□ 0.85
CHD2O14647 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 BRD7P5-201ENST00000299197 1822 ntBASIC20.37■□□□□ 0.85
CHD2O14647 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CHD2O14647 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 MIR566-201ENST00000385187 94 ntBASIC20.37■□□□□ 0.85
CHD2O14647 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC20.37■□□□□ 0.85
CHD2O14647 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC20.37■□□□□ 0.85
CHD2O14647 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CHD2O14647 RN7SL564P-201ENST00000496309 250 ntBASIC20.37■□□□□ 0.85
CHD2O14647 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
CHD2O14647 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC20.37■□□□□ 0.85
CHD2O14647 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 MROH4P-201ENST00000431302 1578 ntBASIC20.37■□□□□ 0.85
CHD2O14647 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 AC021305.1-201ENST00000520656 1514 ntBASIC20.37■□□□□ 0.85
CHD2O14647 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHD2O14647 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD2O14647 AL357373.1-201ENST00000394974 322 ntBASIC20.37■□□□□ 0.85
CHD2O14647 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC20.37■□□□□ 0.85
CHD2O14647 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC20.37■□□□□ 0.85
CHD2O14647 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC20.37■□□□□ 0.85
CHD2O14647 RPS23-207ENST00000511844 530 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD2O14647 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHD2O14647 AC013553.1-201ENST00000560906 267 ntBASIC20.37■□□□□ 0.85
CHD2O14647 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC20.37■□□□□ 0.85
CHD2O14647 AL133467.4-201ENST00000602953 725 ntBASIC20.37■□□□□ 0.85
CHD2O14647 AL627230.2-201ENST00000613254 655 ntBASIC20.37■□□□□ 0.85
CHD2O14647 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CHD2O14647 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.36■□□□□ 0.85
CHD2O14647 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD2O14647 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD2O14647 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD2O14647 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD2O14647 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD2O14647 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHD2O14647 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
CHD2O14647 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD2O14647 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD2O14647 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.36■□□□□ 0.85
CHD2O14647 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD2O14647 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD2O14647 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD2O14647 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms