Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 AC021097.1-201ENST00000607902 574 ntBASIC15.82■□□□□ 0.12
SRRM3A6NNA2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRRM3A6NNA2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 CICP20-201ENST00000443330 2801 ntBASIC15.81■□□□□ 0.12
SRRM3A6NNA2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 AC027612.1-201ENST00000445234 2395 ntBASIC15.81■□□□□ 0.12
SRRM3A6NNA2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 PCDHA3-202ENST00000532566 4594 ntBASIC15.81■□□□□ 0.12
SRRM3A6NNA2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 AC135586.1-201ENST00000539323 574 ntBASIC15.81■□□□□ 0.12
SRRM3A6NNA2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 AL844908.2-201ENST00000609461 460 ntBASIC15.81■□□□□ 0.12
SRRM3A6NNA2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 MIR6727-201ENST00000620702 65 ntBASIC15.81■□□□□ 0.12
SRRM3A6NNA2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.81■□□□□ 0.12
SRRM3A6NNA2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.8■□□□□ 0.12
SRRM3A6NNA2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRRM3A6NNA2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms