Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 AC068587.3-201ENST00000526613 355 ntBASIC12.56□□□□□ -0.4
A0A1W2PRF3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 AC134312.5-201ENST00000568031 1313 ntBASIC12.56□□□□□ -0.4
A0A1W2PRF3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
A0A1W2PRF3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
A0A1W2PRF3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 AC067750.1-201ENST00000608826 6545 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 MIR658-201ENST00000385210 100 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 ACTG1P3-201ENST00000431775 1114 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 AL355864.2-201ENST00000447420 863 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 ENPP7P5-201ENST00000541031 1031 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.55□□□□□ -0.4
A0A1W2PRF3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
A0A1W2PRF3 AC015936.2-201ENST00000593177 259 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 BTNL10-201ENST00000595971 695 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 AC093813.1-201ENST00000605066 256 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 AL512343.1-201ENST00000605837 169 ntBASIC12.55□□□□□ -0.4
A0A1W2PRF3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms