Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 RPSAP31-201ENST00000416648 895 ntBASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 AC009884.2-201ENST00000603110 324 ntBASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HCFC2Q9Y5Z7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 PCDHA1-201ENST00000378133 2726 ntBASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AL627231.1-201ENST00000394467 1125 ntBASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AL355334.1-201ENST00000417713 215 ntBASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC078875.1-201ENST00000431907 724 ntBASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC078991.1-201ENST00000437297 610 ntBASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC087045.2-201ENST00000606279 1003 ntBASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC092171.5-201ENST00000608012 942 ntBASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC051619.9-201ENST00000623237 597 ntBASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 AC012508.2-201ENST00000567613 1472 ntBASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms