Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 IFNL4P1-201ENST00000607083 540 ntBASIC14.43□□□□□ -0.1
AP4S1Q9Y587 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.43□□□□□ -0.1
AP4S1Q9Y587 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP4S1Q9Y587 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AC016397.2-201ENST00000624848 1985 ntBASIC14.42□□□□□ -0.1
AP4S1Q9Y587 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AC092910.1-201ENST00000482027 1129 ntBASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP4S1Q9Y587 AL031595.1-201ENST00000623969 4709 ntBASIC14.41□□□□□ -0.1
AP4S1Q9Y587 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 AC025580.3-201ENST00000617932 1424 ntBASIC14.41□□□□□ -0.1
AP4S1Q9Y587 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 FAM197Y8-203ENST00000450145 560 ntBASIC14.41□□□□□ -0.1
AP4S1Q9Y587 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.41□□□□□ -0.1
AP4S1Q9Y587 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms