Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 AL121723.1-201ENST00000445194 1519 ntBASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 AC138035.3-201ENST00000622706 2791 ntBASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FNDC3AQ9Y2H6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 ST20-AS1-201ENST00000560255 4223 ntBASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 FAM86LP-201ENST00000478302 853 ntBASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 CICP11-201ENST00000434745 2827 ntBASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FNDC3AQ9Y2H6 MST1L-201ENST00000442552 2185 ntBASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 BRWD1P1-201ENST00000401091 371 ntBASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 AL355994.2-201ENST00000447882 704 ntBASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 CSF2RBP1-201ENST00000447905 391 ntBASIC15.6■□□□□ 0.09
FNDC3AQ9Y2H6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms