Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 AL353719.1-201ENST00000566847 864 ntBASIC11.08□□□□□ -0.64
VAMP8Q9BV40 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 MYC-209ENST00000641252 345 ntBASIC11.08□□□□□ -0.64
VAMP8Q9BV40 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
VAMP8Q9BV40 AC010536.1-201ENST00000538868 2611 ntBASIC11.07□□□□□ -0.64
VAMP8Q9BV40 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.07□□□□□ -0.64
VAMP8Q9BV40 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 AL160237.2-201ENST00000556165 472 ntBASIC11.07□□□□□ -0.64
VAMP8Q9BV40 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 AC026992.2-203ENST00000563004 2419 ntBASIC11.07□□□□□ -0.64
VAMP8Q9BV40 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VAMP8Q9BV40 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms