Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 RN7SL67P-201ENST00000492147 296 ntBASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 MIR4722-201ENST00000578292 60 ntBASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 AL109837.1-201ENST00000603272 613 ntBASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FYCO1Q9BQS8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 AC013268.4-201ENST00000637413 2228 ntBASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 CICP23-201ENST00000605013 2741 ntBASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 AC006486.2-201ENST00000624246 2199 ntBASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 AC091951.1-201ENST00000512854 2465 ntBASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
FYCO1Q9BQS8 AHCYP4-201ENST00000419201 1315 ntBASIC23.02■■□□□ 1.27
FYCO1Q9BQS8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 HTR7P1-202ENST00000624664 4411 ntBASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 OR2K2-202ENST00000374428 1038 ntBASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 RN7SL258P-201ENST00000478664 300 ntBASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 AC027237.1-201ENST00000560942 655 ntBASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 PHBP15-201ENST00000574228 665 ntBASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 TBC1D3J-201ENST00000620719 1426 ntBASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 AC105917.1-201ENST00000506637 2539 ntBASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FYCO1Q9BQS8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FYCO1Q9BQS8 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC23■■□□□ 1.27
FYCO1Q9BQS8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 SPCS2P2-201ENST00000603270 608 ntBASIC23■■□□□ 1.27
FYCO1Q9BQS8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 CICP6-201ENST00000457191 2729 ntBASIC23■■□□□ 1.27
FYCO1Q9BQS8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FYCO1Q9BQS8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FYCO1Q9BQS8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC23■■□□□ 1.27
FYCO1Q9BQS8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC23■■□□□ 1.27
FYCO1Q9BQS8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms