Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 HINT2P1-201ENST00000419438 481 ntBASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP2Q96SN8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AJ011931.1-201ENST00000618749 2492 ntBASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 XBP1P1-201ENST00000436573 652 ntBASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AL161670.2-201ENST00000557650 1227 ntBASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AC079336.7-201ENST00000623428 1078 ntBASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP2Q96SN8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AC234782.1-201ENST00000451950 919 ntBASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 NDUFS6P1-201ENST00000485187 316 ntBASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AC016629.1-201ENST00000596579 586 ntBASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AC027601.3-201ENST00000622907 509 ntBASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 TCAF2P1-201ENST00000291129 2421 ntBASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AC018442.1-201ENST00000421439 2061 ntBASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP2Q96SN8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK5RAP2Q96SN8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDK5RAP2Q96SN8 AC144522.1-201ENST00000625111 1658 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms