Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 AL137783.1-201ENST00000623494 1896 ntBASIC15.67■□□□□ 0.1
RPRD1AQ96P16 MYO15B-237ENST00000642007 4893 ntBASIC15.67■□□□□ 0.1
RPRD1AQ96P16 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 AC055811.4-201ENST00000624039 1754 ntBASIC15.67■□□□□ 0.1
RPRD1AQ96P16 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 AL138709.1-201ENST00000614840 1693 ntBASIC15.67■□□□□ 0.1
RPRD1AQ96P16 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 MIR1909-201ENST00000411312 80 ntBASIC15.67■□□□□ 0.1
RPRD1AQ96P16 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 EIF3FP3-201ENST00000434851 1086 ntBASIC15.67■□□□□ 0.1
RPRD1AQ96P16 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 KLF2P4-201ENST00000451959 1225 ntBASIC15.67■□□□□ 0.1
RPRD1AQ96P16 CTBP2P5-201ENST00000454986 1264 ntBASIC15.67■□□□□ 0.1
RPRD1AQ96P16 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 REXO1L2P-201ENST00000425429 2069 ntBASIC15.67■□□□□ 0.1
RPRD1AQ96P16 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
RPRD1AQ96P16 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 AC023157.3-201ENST00000619086 2088 ntBASIC15.66■□□□□ 0.1
RPRD1AQ96P16 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 AC022210.1-201ENST00000449856 793 ntBASIC15.66■□□□□ 0.1
RPRD1AQ96P16 AC104989.1-201ENST00000519711 778 ntBASIC15.66■□□□□ 0.1
RPRD1AQ96P16 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 SNX29P1-201ENST00000548357 1007 ntBASIC15.66■□□□□ 0.1
RPRD1AQ96P16 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 MIR6805-201ENST00000615055 62 ntBASIC15.66■□□□□ 0.1
RPRD1AQ96P16 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPRD1AQ96P16 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms