Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 AC079776.1-201ENST00000401540 1152 ntBASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 SLC25A47P1-201ENST00000531577 414 ntBASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 MIR5189-201ENST00000577370 114 ntBASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 AC006486.2-201ENST00000624246 2199 ntBASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 AP005482.1-201ENST00000563722 1273 ntBASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 TNRC18P2-201ENST00000417666 2714 ntBASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH3KBP1Q96B97 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms