Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 DRD5P1-201ENST00000456605 1438 ntBASIC16.09■□□□□ 0.17
ATP2A3Q93084 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP2A3Q93084 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ATP2A3Q93084 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP2A3Q93084 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP2A3Q93084 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP2A3Q93084 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATP2A3Q93084 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATP2A3Q93084 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.08■□□□□ 0.17
ATP2A3Q93084 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATP2A3Q93084 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
ATP2A3Q93084 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 FAM86MP-201ENST00000340703 885 ntBASIC16.08■□□□□ 0.16
ATP2A3Q93084 ACKR1-201ENST00000368121 1240 ntBASIC16.08■□□□□ 0.16
ATP2A3Q93084 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 AC016694.1-201ENST00000434179 700 ntBASIC16.08■□□□□ 0.16
ATP2A3Q93084 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 RNA5SP412-201ENST00000516234 123 ntBASIC16.08■□□□□ 0.16
ATP2A3Q93084 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 AC138969.2-201ENST00000532739 9932 ntBASIC16.08■□□□□ 0.16
ATP2A3Q93084 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ATP2A3Q93084 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP2A3Q93084 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 AC079316.1-201ENST00000548397 411 ntBASIC16.07■□□□□ 0.16
ATP2A3Q93084 AL583810.1-201ENST00000553344 1045 ntBASIC16.07■□□□□ 0.16
ATP2A3Q93084 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 AC107373.2-201ENST00000607735 490 ntBASIC16.07■□□□□ 0.16
ATP2A3Q93084 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms