Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 AL513523.2-202ENST00000427283 2040 ntBASIC16.04■□□□□ 0.16
TTC16Q8NEE8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 KRT8P35-201ENST00000483942 1338 ntBASIC16.04■□□□□ 0.16
TTC16Q8NEE8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 KRT90P-201ENST00000549264 1064 ntBASIC16.04■□□□□ 0.16
TTC16Q8NEE8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 AC138951.2-201ENST00000623455 1161 ntBASIC16.04■□□□□ 0.16
TTC16Q8NEE8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TTC16Q8NEE8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 AC046158.3-201ENST00000624947 2558 ntBASIC16.03■□□□□ 0.16
TTC16Q8NEE8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 FAM197Y7-201ENST00000432892 766 ntBASIC16.03■□□□□ 0.16
TTC16Q8NEE8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 AC022137.2-201ENST00000503482 481 ntBASIC16.03■□□□□ 0.16
TTC16Q8NEE8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 FAM8A2P-201ENST00000528813 1142 ntBASIC16.03■□□□□ 0.16
TTC16Q8NEE8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.03■□□□□ 0.16
TTC16Q8NEE8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 AC068418.2-201ENST00000577309 3703 ntBASIC16.03■□□□□ 0.16
TTC16Q8NEE8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TTC16Q8NEE8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms