Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 BRI3BPP1-201ENST00000594224 787 ntBASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 AL662799.1-202ENST00000614205 422 ntBASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 ACE3P-201ENST00000423435 1973 ntBASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 AC007787.1-201ENST00000588095 1583 ntBASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 LINC00528-201ENST00000600723 2160 ntBASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.08□□□□□ -0.48
TTC9CQ8N5M4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 AL138799.1-201ENST00000448213 1675 ntBASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 FAM207CP-201ENST00000443486 507 ntBASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 TSPY16P-201ENST00000449843 468 ntBASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 AC093525.8-201ENST00000624099 1342 ntBASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TTC9CQ8N5M4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms