Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 AC138466.3-201ENST00000619983 221 ntBASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SYNPOQ8N3V7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.06
SYNPOQ8N3V7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 AL161670.2-201ENST00000557650 1227 ntBASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 AC013355.1-201ENST00000562625 723 ntBASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 BNIP3P13-201ENST00000599968 566 ntBASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 AC022532.1-201ENST00000624563 1728 ntBASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SYNPOQ8N3V7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AC253536.4-201ENST00000440539 267 ntBASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AC024681.1-201ENST00000521917 487 ntBASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 MIR3907-201ENST00000579424 151 ntBASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SYNPOQ8N3V7 SPCS2P2-201ENST00000603270 608 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms