Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
LYSMD2Q8IV50 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LYSMD2Q8IV50 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
LYSMD2Q8IV50 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.27
LYSMD2Q8IV50 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LYSMD2Q8IV50 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
LYSMD2Q8IV50 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.4□□□□□ -0.27
LYSMD2Q8IV50 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 AL691432.1-201ENST00000596308 1422 ntBASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 AKR1C7P-201ENST00000305623 895 ntBASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 TSPY19P-201ENST00000418461 509 ntBASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 TSPY18P-201ENST00000441642 509 ntBASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 AC022447.6-201ENST00000515522 438 ntBASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 KRT18P21-201ENST00000515767 1272 ntBASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 AC109635.5-201ENST00000533593 962 ntBASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.39□□□□□ -0.27
LYSMD2Q8IV50 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms