Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 PCDH8P1-201ENST00000428983 2773 ntBASIC12.91□□□□□ -0.34
LRRK2Q5S007 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 CFL1P6-201ENST00000400899 494 ntBASIC12.91□□□□□ -0.34
LRRK2Q5S007 NME6-208ENST00000435684 599 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 ALG3P1-201ENST00000508806 1114 ntBASIC12.91□□□□□ -0.34
LRRK2Q5S007 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 AC092612.1-201ENST00000514501 998 ntBASIC12.91□□□□□ -0.34
LRRK2Q5S007 AC092862.1-201ENST00000541534 533 ntBASIC12.91□□□□□ -0.34
LRRK2Q5S007 AC138701.2-201ENST00000553634 226 ntBASIC12.91□□□□□ -0.34
LRRK2Q5S007 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 HIST1H2APS2-201ENST00000454426 370 ntBASIC12.91□□□□□ -0.34
LRRK2Q5S007 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 AL160191.2-201ENST00000603975 601 ntBASIC12.91□□□□□ -0.34
LRRK2Q5S007 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LRRK2Q5S007 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRK2Q5S007 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 CYP4F23P-201ENST00000593402 1579 ntBASIC12.9□□□□□ -0.34
LRRK2Q5S007 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.9□□□□□ -0.34
LRRK2Q5S007 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 AC254633.1-201ENST00000606790 345 ntBASIC12.9□□□□□ -0.34
LRRK2Q5S007 AC008536.3-201ENST00000623282 1599 ntBASIC12.9□□□□□ -0.34
LRRK2Q5S007 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 GOLGA2P7-209ENST00000560408 745 ntBASIC12.9□□□□□ -0.34
LRRK2Q5S007 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRRK2Q5S007 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LRRK2Q5S007 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LRRK2Q5S007 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
LRRK2Q5S007 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.9□□□□□ -0.35
LRRK2Q5S007 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.9□□□□□ -0.35
LRRK2Q5S007 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LRRK2Q5S007 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms