Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 CEP164P1-201ENST00000455142 418 ntBASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 AC116345.2-201ENST00000512837 523 ntBASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 Z98259.2-201ENST00000641583 609 ntBASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRIM71Q2Q1W2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 MBLAC2-202ENST00000514906 1936 ntBASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 AC006058.4-201ENST00000624016 1670 ntBASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 RCC2P8-201ENST00000502779 1035 ntBASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 AL513523.2-202ENST00000427283 2040 ntBASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 AC006480.2-201ENST00000609770 1337 ntBASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.41■□□□□ 0.22
TRIM71Q2Q1W2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 AC069218.1-201ENST00000435269 762 ntBASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 AC253536.4-201ENST00000440539 267 ntBASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms