Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SREBF2Q12772 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SREBF2Q12772 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SREBF2Q12772 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SREBF2Q12772 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.09■□□□□ 0.33
SREBF2Q12772 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SREBF2Q12772 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.09■□□□□ 0.33
SREBF2Q12772 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.09■□□□□ 0.33
SREBF2Q12772 AC138701.2-201ENST00000553634 226 ntBASIC17.09■□□□□ 0.33
SREBF2Q12772 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.09■□□□□ 0.33
SREBF2Q12772 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.09■□□□□ 0.33
SREBF2Q12772 AC018695.6-201ENST00000614011 534 ntBASIC17.09■□□□□ 0.33
SREBF2Q12772 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.09■□□□□ 0.33
SREBF2Q12772 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.09■□□□□ 0.33
SREBF2Q12772 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.09■□□□□ 0.33
SREBF2Q12772 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
SREBF2Q12772 AHCYP4-201ENST00000419201 1315 ntBASIC17.09■□□□□ 0.33
SREBF2Q12772 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.09■□□□□ 0.33
SREBF2Q12772 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.09■□□□□ 0.33
SREBF2Q12772 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.09■□□□□ 0.33
SREBF2Q12772 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SREBF2Q12772 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.09■□□□□ 0.33
SREBF2Q12772 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.09■□□□□ 0.33
SREBF2Q12772 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.08■□□□□ 0.33
SREBF2Q12772 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.08■□□□□ 0.33
SREBF2Q12772 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SREBF2Q12772 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.08■□□□□ 0.33
SREBF2Q12772 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SREBF2Q12772 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.08■□□□□ 0.32
SREBF2Q12772 AC003102.2-201ENST00000589195 1469 ntBASIC17.08■□□□□ 0.32
SREBF2Q12772 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.08■□□□□ 0.32
SREBF2Q12772 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SREBF2Q12772 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SREBF2Q12772 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.08■□□□□ 0.32
SREBF2Q12772 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.08■□□□□ 0.32
SREBF2Q12772 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.08■□□□□ 0.32
SREBF2Q12772 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.08■□□□□ 0.32
SREBF2Q12772 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.08■□□□□ 0.32
SREBF2Q12772 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.08■□□□□ 0.32
SREBF2Q12772 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SREBF2Q12772 ZBED1P1-201ENST00000502364 1930 ntBASIC17.08■□□□□ 0.32
SREBF2Q12772 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.07■□□□□ 0.32
SREBF2Q12772 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.07■□□□□ 0.32
SREBF2Q12772 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SREBF2Q12772 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SREBF2Q12772 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.07■□□□□ 0.32
SREBF2Q12772 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 FAM90A21P-201ENST00000510875 1396 ntBASIC17.07■□□□□ 0.32
SREBF2Q12772 FAM90A15P-201ENST00000514465 1395 ntBASIC17.07■□□□□ 0.32
SREBF2Q12772 FAM90A6P-201ENST00000515148 1394 ntBASIC17.07■□□□□ 0.32
SREBF2Q12772 FAM90A16P-201ENST00000526662 1395 ntBASIC17.07■□□□□ 0.32
SREBF2Q12772 FAM90A9P-201ENST00000527940 1395 ntBASIC17.07■□□□□ 0.32
SREBF2Q12772 FAM90A5P-201ENST00000528738 1395 ntBASIC17.07■□□□□ 0.32
SREBF2Q12772 FAM90A14P-201ENST00000530386 1395 ntBASIC17.07■□□□□ 0.32
SREBF2Q12772 FAM90A13P-201ENST00000534703 1395 ntBASIC17.07■□□□□ 0.32
SREBF2Q12772 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SREBF2Q12772 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SREBF2Q12772 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms