Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE4BQ07343 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE4BQ07343 AP000845.1-201ENST00000581677 2131 ntBASIC17.96■□□□□ 0.47
PDE4BQ07343 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE4BQ07343 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE4BQ07343 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PDE4BQ07343 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.96■□□□□ 0.47
PDE4BQ07343 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE4BQ07343 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE4BQ07343 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE4BQ07343 AC138035.3-201ENST00000622706 2791 ntBASIC17.96■□□□□ 0.46
PDE4BQ07343 AC006486.2-201ENST00000624246 2199 ntBASIC17.96■□□□□ 0.46
PDE4BQ07343 NORAD-201ENST00000565493 5339 ntBASIC17.96■□□□□ 0.46
PDE4BQ07343 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE4BQ07343 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE4BQ07343 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
PDE4BQ07343 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE4BQ07343 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.95■□□□□ 0.46
PDE4BQ07343 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.95■□□□□ 0.46
PDE4BQ07343 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.95■□□□□ 0.46
PDE4BQ07343 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE4BQ07343 AC245100.3-201ENST00000441281 285 ntBASIC17.95■□□□□ 0.46
PDE4BQ07343 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.95■□□□□ 0.46
PDE4BQ07343 AL590640.2-201ENST00000457038 527 ntBASIC17.95■□□□□ 0.46
PDE4BQ07343 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE4BQ07343 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.95■□□□□ 0.46
PDE4BQ07343 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE4BQ07343 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
PDE4BQ07343 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.95■□□□□ 0.46
PDE4BQ07343 AC023310.1-201ENST00000554836 735 ntBASIC17.95■□□□□ 0.46
PDE4BQ07343 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.95■□□□□ 0.46
PDE4BQ07343 AC006453.4-201ENST00000636949 1252 ntBASIC17.95■□□□□ 0.46
PDE4BQ07343 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
PDE4BQ07343 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE4BQ07343 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.95■□□□□ 0.46
PDE4BQ07343 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE4BQ07343 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE4BQ07343 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.95■□□□□ 0.46
PDE4BQ07343 AL137783.1-201ENST00000623494 1896 ntBASIC17.95■□□□□ 0.46
PDE4BQ07343 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE4BQ07343 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDE4BQ07343 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDE4BQ07343 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE4BQ07343 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.94■□□□□ 0.46
PDE4BQ07343 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.94■□□□□ 0.46
PDE4BQ07343 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 AC026954.1-201ENST00000429771 1293 ntBASIC17.94■□□□□ 0.46
PDE4BQ07343 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE4BQ07343 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE4BQ07343 BNIP3P42-201ENST00000454982 569 ntBASIC17.94■□□□□ 0.46
PDE4BQ07343 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE4BQ07343 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 BNIP3P29-201ENST00000598302 571 ntBASIC17.94■□□□□ 0.46
PDE4BQ07343 ECM1P1-201ENST00000604092 1279 ntBASIC17.94■□□□□ 0.46
PDE4BQ07343 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.94■□□□□ 0.46
PDE4BQ07343 AC011447.5-201ENST00000616168 564 ntBASIC17.94■□□□□ 0.46
PDE4BQ07343 AC008687.7-202ENST00000637404 953 ntBASIC17.94■□□□□ 0.46
PDE4BQ07343 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PDE4BQ07343 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.94■□□□□ 0.46
PDE4BQ07343 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE4BQ07343 AC023157.3-201ENST00000619086 2088 ntBASIC17.94■□□□□ 0.46
PDE4BQ07343 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE4BQ07343 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE4BQ07343 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PDE4BQ07343 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE4BQ07343 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms