Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
VBP1P61758 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.69□□□□□ -0.22
VBP1P61758 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.69□□□□□ -0.22
VBP1P61758 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 RPS8P6-201ENST00000426177 609 ntBASIC13.69□□□□□ -0.22
VBP1P61758 KRT18P27-201ENST00000427733 1299 ntBASIC13.69□□□□□ -0.22
VBP1P61758 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.69□□□□□ -0.22
VBP1P61758 AC136632.2-201ENST00000512891 861 ntBASIC13.69□□□□□ -0.22
VBP1P61758 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.69□□□□□ -0.22
VBP1P61758 AL732292.2-201ENST00000609649 430 ntBASIC13.69□□□□□ -0.22
VBP1P61758 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 KRT8P22-201ENST00000562317 1415 ntBASIC13.69□□□□□ -0.22
VBP1P61758 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VBP1P61758 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.69□□□□□ -0.22
VBP1P61758 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 AC073548.1-201ENST00000624088 1882 ntBASIC13.69□□□□□ -0.22
VBP1P61758 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
VBP1P61758 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.69□□□□□ -0.22
VBP1P61758 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.69□□□□□ -0.22
VBP1P61758 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.69□□□□□ -0.22
VBP1P61758 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VBP1P61758 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 REXO1L4P-201ENST00000605109 1937 ntBASIC13.68□□□□□ -0.22
VBP1P61758 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 AC023794.5-201ENST00000564380 2157 ntBASIC13.68□□□□□ -0.22
VBP1P61758 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
VBP1P61758 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VBP1P61758 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
VBP1P61758 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.68□□□□□ -0.22
VBP1P61758 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.68□□□□□ -0.22
VBP1P61758 FGFR3P6-201ENST00000457012 610 ntBASIC13.68□□□□□ -0.22
VBP1P61758 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.68□□□□□ -0.22
VBP1P61758 CXCL1P1-201ENST00000502804 216 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms