Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SEC61A1P61619 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.43□□□□□ -0.26
SEC61A1P61619 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SEC61A1P61619 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
SEC61A1P61619 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SEC61A1P61619 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 AL136982.4-201ENST00000437689 1740 ntBASIC13.42□□□□□ -0.26
SEC61A1P61619 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SEC61A1P61619 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.42□□□□□ -0.26
SEC61A1P61619 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.42□□□□□ -0.26
SEC61A1P61619 AL035633.1-201ENST00000406139 838 ntBASIC13.42□□□□□ -0.26
SEC61A1P61619 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.42□□□□□ -0.26
SEC61A1P61619 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SEC61A1P61619 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.42□□□□□ -0.26
SEC61A1P61619 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.42□□□□□ -0.26
SEC61A1P61619 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.42□□□□□ -0.26
SEC61A1P61619 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.42□□□□□ -0.26
SEC61A1P61619 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.42□□□□□ -0.26
SEC61A1P61619 LINC02560-201ENST00000596379 459 ntBASIC13.42□□□□□ -0.26
SEC61A1P61619 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.42□□□□□ -0.26
SEC61A1P61619 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.42□□□□□ -0.26
SEC61A1P61619 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.42□□□□□ -0.26
SEC61A1P61619 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 AC136759.1-202ENST00000530858 2194 ntBASIC13.42□□□□□ -0.26
SEC61A1P61619 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.42□□□□□ -0.26
SEC61A1P61619 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
SEC61A1P61619 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
SEC61A1P61619 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.42□□□□□ -0.26
SEC61A1P61619 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SEC61A1P61619 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SEC61A1P61619 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.41□□□□□ -0.26
SEC61A1P61619 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.41□□□□□ -0.26
SEC61A1P61619 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.41□□□□□ -0.26
SEC61A1P61619 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.41□□□□□ -0.26
SEC61A1P61619 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.41□□□□□ -0.26
SEC61A1P61619 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.41□□□□□ -0.26
SEC61A1P61619 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.41□□□□□ -0.26
SEC61A1P61619 SERBP1P5-201ENST00000510079 1181 ntBASIC13.41□□□□□ -0.26
SEC61A1P61619 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SEC61A1P61619 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SEC61A1P61619 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.41□□□□□ -0.26
SEC61A1P61619 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.41□□□□□ -0.26
SEC61A1P61619 AC026979.3-201ENST00000607315 403 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms