Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.14□□□□□ -0.63
APOC4P55056 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.14□□□□□ -0.63
APOC4P55056 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.14□□□□□ -0.63
APOC4P55056 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.14□□□□□ -0.63
APOC4P55056 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.14□□□□□ -0.63
APOC4P55056 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.14□□□□□ -0.63
APOC4P55056 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
APOC4P55056 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.14□□□□□ -0.63
APOC4P55056 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC11.14□□□□□ -0.63
APOC4P55056 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.14□□□□□ -0.63
APOC4P55056 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.14□□□□□ -0.63
APOC4P55056 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 AC078819.1-201ENST00000547454 765 ntBASIC11.14□□□□□ -0.63
APOC4P55056 AC012085.1-201ENST00000548270 765 ntBASIC11.14□□□□□ -0.63
APOC4P55056 DUX4L45-201ENST00000566406 1057 ntBASIC11.14□□□□□ -0.63
APOC4P55056 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.14□□□□□ -0.63
APOC4P55056 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC11.14□□□□□ -0.63
APOC4P55056 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.14□□□□□ -0.63
APOC4P55056 ETV2-208ENST00000621247 941 ntTSL 5 BASIC11.14□□□□□ -0.63
APOC4P55056 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.14□□□□□ -0.63
APOC4P55056 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
APOC4P55056 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.14□□□□□ -0.63
APOC4P55056 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
APOC4P55056 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
APOC4P55056 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
APOC4P55056 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
APOC4P55056 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
APOC4P55056 AC092850.2-201ENST00000623821 2697 ntBASIC11.13□□□□□ -0.63
APOC4P55056 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
APOC4P55056 AC055811.4-201ENST00000624039 1754 ntBASIC11.13□□□□□ -0.63
APOC4P55056 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
APOC4P55056 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
APOC4P55056 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 TMBIM7P-203ENST00000641617 1718 ntBASIC11.13□□□□□ -0.63
APOC4P55056 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.13□□□□□ -0.63
APOC4P55056 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
APOC4P55056 MIR1202-201ENST00000408529 83 ntBASIC11.13□□□□□ -0.63
APOC4P55056 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.13□□□□□ -0.63
APOC4P55056 AC026954.1-201ENST00000429771 1293 ntBASIC11.13□□□□□ -0.63
APOC4P55056 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.13□□□□□ -0.63
APOC4P55056 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC11.13□□□□□ -0.63
APOC4P55056 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC11.13□□□□□ -0.63
APOC4P55056 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 ECM1P1-201ENST00000604092 1279 ntBASIC11.13□□□□□ -0.63
APOC4P55056 MIR6799-201ENST00000620297 69 ntBASIC11.13□□□□□ -0.63
APOC4P55056 AL033527.4-201ENST00000641026 673 ntBASIC11.13□□□□□ -0.63
APOC4P55056 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
APOC4P55056 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.13□□□□□ -0.63
APOC4P55056 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
APOC4P55056 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
APOC4P55056 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms