Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 AC007787.1-201ENST00000588095 1583 ntBASIC12.29□□□□□ -0.44
RAB5CP51148 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RAB5CP51148 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RAB5CP51148 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 AC019294.4-201ENST00000561777 2905 ntBASIC12.28□□□□□ -0.44
RAB5CP51148 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RAB5CP51148 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 INE2-201ENST00000630399 1874 ntBASIC12.28□□□□□ -0.44
RAB5CP51148 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 AL137013.1-201ENST00000432946 1228 ntBASIC12.28□□□□□ -0.44
RAB5CP51148 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 AL671277.2-201ENST00000458060 996 ntBASIC12.28□□□□□ -0.44
RAB5CP51148 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB5CP51148 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 AC024267.1-201ENST00000582320 895 ntBASIC12.28□□□□□ -0.44
RAB5CP51148 AC092329.2-201ENST00000598402 547 ntBASIC12.28□□□□□ -0.44
RAB5CP51148 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.28□□□□□ -0.44
RAB5CP51148 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 AL645728.2-201ENST00000641974 660 ntBASIC12.28□□□□□ -0.44
RAB5CP51148 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 KRT18P1-202ENST00000452408 1331 ntBASIC12.28□□□□□ -0.44
RAB5CP51148 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB5CP51148 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB5CP51148 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB5CP51148 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB5CP51148 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB5CP51148 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.27□□□□□ -0.44
RAB5CP51148 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB5CP51148 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RAB5CP51148 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.27□□□□□ -0.44
RAB5CP51148 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB5CP51148 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB5CP51148 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB5CP51148 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.27□□□□□ -0.44
RAB5CP51148 AP001972.5-201ENST00000624624 2338 ntBASIC12.27□□□□□ -0.44
RAB5CP51148 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.27□□□□□ -0.44
RAB5CP51148 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB5CP51148 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
RAB5CP51148 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
RAB5CP51148 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB5CP51148 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB5CP51148 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms