Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.1□□□□□ -0.47
CDC34P49427 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CDC34P49427 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CDC34P49427 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.1□□□□□ -0.47
CDC34P49427 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CDC34P49427 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CDC34P49427 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CDC34P49427 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CDC34P49427 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CDC34P49427 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 AC012508.2-201ENST00000567613 1472 ntBASIC12.09□□□□□ -0.47
CDC34P49427 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 AC089987.1-201ENST00000551654 2209 ntBASIC12.09□□□□□ -0.47
CDC34P49427 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
CDC34P49427 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.09□□□□□ -0.47
CDC34P49427 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.09□□□□□ -0.47
CDC34P49427 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
CDC34P49427 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.09□□□□□ -0.47
CDC34P49427 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.09□□□□□ -0.47
CDC34P49427 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 AL031008.1-201ENST00000619963 541 ntBASIC12.09□□□□□ -0.47
CDC34P49427 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC34P49427 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC34P49427 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CDC34P49427 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC34P49427 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CDC34P49427 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
CDC34P49427 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.08□□□□□ -0.47
CDC34P49427 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.08□□□□□ -0.47
CDC34P49427 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
CDC34P49427 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms