Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CAPN3P20807 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.71□□□□□ -0.05
CAPN3P20807 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CAPN3P20807 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.71□□□□□ -0.05
CAPN3P20807 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CAPN3P20807 SPDYE22P-201ENST00000582158 798 ntBASIC14.71□□□□□ -0.05
CAPN3P20807 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.71□□□□□ -0.05
CAPN3P20807 AC025181.2-201ENST00000606994 802 ntBASIC14.71□□□□□ -0.05
CAPN3P20807 AL662799.1-202ENST00000614205 422 ntBASIC14.71□□□□□ -0.05
CAPN3P20807 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.71□□□□□ -0.05
CAPN3P20807 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CAPN3P20807 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.71□□□□□ -0.05
CAPN3P20807 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.71□□□□□ -0.05
CAPN3P20807 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
CAPN3P20807 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CAPN3P20807 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CAPN3P20807 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CAPN3P20807 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CAPN3P20807 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CAPN3P20807 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CAPN3P20807 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CAPN3P20807 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.71□□□□□ -0.05
CAPN3P20807 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CAPN3P20807 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CAPN3P20807 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CAPN3P20807 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.71□□□□□ -0.06
CAPN3P20807 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CAPN3P20807 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CAPN3P20807 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CAPN3P20807 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.71□□□□□ -0.06
CAPN3P20807 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CAPN3P20807 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.7□□□□□ -0.06
CAPN3P20807 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CAPN3P20807 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CAPN3P20807 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
CAPN3P20807 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CAPN3P20807 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 CU639417.3-201ENST00000624240 1404 ntBASIC14.7□□□□□ -0.06
CAPN3P20807 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CAPN3P20807 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.7□□□□□ -0.06
CAPN3P20807 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CAPN3P20807 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.7□□□□□ -0.06
CAPN3P20807 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.7□□□□□ -0.06
CAPN3P20807 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CAPN3P20807 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.7□□□□□ -0.06
CAPN3P20807 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.7□□□□□ -0.06
CAPN3P20807 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.7□□□□□ -0.06
CAPN3P20807 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CAPN3P20807 RN7SL828P-201ENST00000607615 303 ntBASIC14.7□□□□□ -0.06
CAPN3P20807 AC003101.2-201ENST00000612557 442 ntBASIC14.7□□□□□ -0.06
CAPN3P20807 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.7□□□□□ -0.06
CAPN3P20807 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.7□□□□□ -0.06
CAPN3P20807 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.7□□□□□ -0.06
CAPN3P20807 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CAPN3P20807 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CAPN3P20807 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.7□□□□□ -0.06
CAPN3P20807 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.7□□□□□ -0.06
CAPN3P20807 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CAPN3P20807 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CAPN3P20807 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.69□□□□□ -0.06
CAPN3P20807 AC138969.3-201ENST00000546612 1459 ntBASIC14.69□□□□□ -0.06
CAPN3P20807 AC138932.2-201ENST00000548268 1459 ntBASIC14.69□□□□□ -0.06
CAPN3P20807 AC126755.4-201ENST00000549796 1459 ntBASIC14.69□□□□□ -0.06
CAPN3P20807 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CAPN3P20807 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CAPN3P20807 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN3P20807 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 AC007787.1-201ENST00000588095 1583 ntBASIC14.69□□□□□ -0.06
CAPN3P20807 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN3P20807 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms