Protein–RNA interactions for Protein: P18085

ARF4, ADP-ribosylation factor 4, humanhuman

Predicted RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4P18085 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARF4P18085 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARF4P18085 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARF4P18085 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARF4P18085 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARF4P18085 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
ARF4P18085 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ARF4P18085 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.41■□□□□ 0.22
ARF4P18085 AC009093.2-202ENST00000620513 2079 ntBASIC16.41■□□□□ 0.22
ARF4P18085 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARF4P18085 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ARF4P18085 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 AC020907.1-201ENST00000616460 1350 ntBASIC16.4■□□□□ 0.22
ARF4P18085 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.4■□□□□ 0.22
ARF4P18085 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.4■□□□□ 0.22
ARF4P18085 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 RN7SKP230-201ENST00000365642 335 ntBASIC16.4■□□□□ 0.22
ARF4P18085 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.4■□□□□ 0.22
ARF4P18085 AC104306.2-201ENST00000451877 341 ntBASIC16.4■□□□□ 0.22
ARF4P18085 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
ARF4P18085 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.4■□□□□ 0.22
ARF4P18085 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.4■□□□□ 0.22
ARF4P18085 AC244157.2-201ENST00000616239 1006 ntBASIC16.4■□□□□ 0.22
ARF4P18085 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ARF4P18085 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ARF4P18085 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.4■□□□□ 0.22
ARF4P18085 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ARF4P18085 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ARF4P18085 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARF4P18085 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.4■□□□□ 0.22
ARF4P18085 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ARF4P18085 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.4■□□□□ 0.22
ARF4P18085 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.4■□□□□ 0.22
ARF4P18085 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.4■□□□□ 0.22
ARF4P18085 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ARF4P18085 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ARF4P18085 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
ARF4P18085 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ARF4P18085 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.39■□□□□ 0.21
ARF4P18085 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.39■□□□□ 0.21
ARF4P18085 MIR663B-201ENST00000408361 115 ntBASIC16.39■□□□□ 0.21
ARF4P18085 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.39■□□□□ 0.21
ARF4P18085 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ARF4P18085 AC006033.1-201ENST00000440505 426 ntBASIC16.39■□□□□ 0.21
ARF4P18085 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.39■□□□□ 0.21
ARF4P18085 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 AC100850.1-201ENST00000506768 649 ntBASIC16.39■□□□□ 0.21
ARF4P18085 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.39■□□□□ 0.21
ARF4P18085 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.39■□□□□ 0.21
ARF4P18085 AC104982.3-201ENST00000581995 514 ntBASIC16.39■□□□□ 0.21
ARF4P18085 AC243960.2-201ENST00000600996 747 ntBASIC16.39■□□□□ 0.21
ARF4P18085 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.39■□□□□ 0.21
ARF4P18085 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ARF4P18085 MIR6787-201ENST00000616675 61 ntBASIC16.39■□□□□ 0.21
ARF4P18085 AP001002.3-201ENST00000623482 206 ntBASIC16.39■□□□□ 0.21
ARF4P18085 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.39■□□□□ 0.21
ARF4P18085 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
ARF4P18085 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 AL138725.1-201ENST00000407347 1314 ntBASIC16.39■□□□□ 0.21
ARF4P18085 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.39■□□□□ 0.21
ARF4P18085 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
ARF4P18085 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.39■□□□□ 0.21
ARF4P18085 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ARF4P18085 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ARF4P18085 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms