Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL2P13500 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCL2P13500 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL2P13500 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCL2P13500 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CCL2P13500 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCL2P13500 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL2P13500 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCL2P13500 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
CCL2P13500 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CCL2P13500 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL2P13500 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.29□□□□□ -0.28
CCL2P13500 AC023824.1-201ENST00000562945 2975 ntBASIC13.29□□□□□ -0.28
CCL2P13500 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL2P13500 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL2P13500 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL2P13500 AC010319.3-201ENST00000597028 470 ntBASIC13.29□□□□□ -0.28
CCL2P13500 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL2P13500 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCL2P13500 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 AC093525.8-201ENST00000624099 1342 ntBASIC13.29□□□□□ -0.28
CCL2P13500 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL2P13500 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL2P13500 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL2P13500 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL2P13500 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 AC012508.2-201ENST00000567613 1472 ntBASIC13.29□□□□□ -0.28
CCL2P13500 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL2P13500 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL2P13500 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL2P13500 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCL2P13500 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL2P13500 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL2P13500 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCL2P13500 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL2P13500 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CCL2P13500 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL2P13500 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CCL2P13500 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCL2P13500 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 RNU1-114P-201ENST00000365297 166 ntBASIC13.28□□□□□ -0.28
CCL2P13500 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL2P13500 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL2P13500 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL2P13500 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL2P13500 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms