Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
THRAP10827 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.35■□□□□ 0.05
THRAP10827 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.35■□□□□ 0.05
THRAP10827 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.35■□□□□ 0.05
THRAP10827 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
THRAP10827 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.35■□□□□ 0.05
THRAP10827 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.35■□□□□ 0.05
THRAP10827 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
THRAP10827 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.35■□□□□ 0.05
THRAP10827 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
THRAP10827 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.35■□□□□ 0.05
THRAP10827 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.35■□□□□ 0.05
THRAP10827 MIR4313-201ENST00000580760 101 ntBASIC15.35■□□□□ 0.05
THRAP10827 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.35■□□□□ 0.05
THRAP10827 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.35■□□□□ 0.05
THRAP10827 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 ZBED1P1-201ENST00000502364 1930 ntBASIC15.35■□□□□ 0.05
THRAP10827 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
THRAP10827 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.35■□□□□ 0.05
THRAP10827 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
THRAP10827 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
THRAP10827 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
THRAP10827 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
THRAP10827 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.34■□□□□ 0.05
THRAP10827 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.34■□□□□ 0.05
THRAP10827 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 RARRES2P5-201ENST00000564013 466 ntBASIC15.34■□□□□ 0.05
THRAP10827 CTBP2P3-201ENST00000585629 1255 ntBASIC15.34■□□□□ 0.05
THRAP10827 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.34■□□□□ 0.05
THRAP10827 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.34■□□□□ 0.05
THRAP10827 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
THRAP10827 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
THRAP10827 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms