Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.42■□□□□ 0.38
TPM2P07951 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TPM2P07951 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TPM2P07951 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM2P07951 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM2P07951 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM2P07951 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM2P07951 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM2P07951 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM2P07951 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM2P07951 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM2P07951 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.41■□□□□ 0.38
TPM2P07951 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 FAM8A3P-201ENST00000427218 844 ntBASIC17.41■□□□□ 0.38
TPM2P07951 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM2P07951 PHKG1P2-201ENST00000457537 863 ntBASIC17.41■□□□□ 0.38
TPM2P07951 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.41■□□□□ 0.38
TPM2P07951 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.41■□□□□ 0.38
TPM2P07951 KRT8P23-201ENST00000560090 1207 ntBASIC17.41■□□□□ 0.38
TPM2P07951 AC106730.1-201ENST00000566722 1090 ntBASIC17.41■□□□□ 0.38
TPM2P07951 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM2P07951 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TPM2P07951 BX640515.1-201ENST00000617215 977 ntBASIC17.41■□□□□ 0.38
TPM2P07951 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.41■□□□□ 0.38
TPM2P07951 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM2P07951 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM2P07951 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.41■□□□□ 0.38
TPM2P07951 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM2P07951 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TPM2P07951 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC17.4■□□□□ 0.38
TPM2P07951 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TPM2P07951 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TPM2P07951 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM2P07951 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TPM2P07951 OS9-206ENST00000435406 2346 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM2P07951 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
TPM2P07951 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.4■□□□□ 0.38
TPM2P07951 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.4■□□□□ 0.38
TPM2P07951 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.4■□□□□ 0.38
TPM2P07951 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.4■□□□□ 0.38
TPM2P07951 AC026120.1-201ENST00000611536 926 ntBASIC17.4■□□□□ 0.38
TPM2P07951 AC120114.3-201ENST00000611923 658 ntBASIC17.4■□□□□ 0.38
TPM2P07951 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.4■□□□□ 0.38
TPM2P07951 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM2P07951 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.4■□□□□ 0.38
TPM2P07951 CICP16-201ENST00000502609 2813 ntBASIC17.4■□□□□ 0.38
TPM2P07951 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM2P07951 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TPM2P07951 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms